BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018A09SP1|AL427246
(812 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig780 1568 0.0
>3x_Contig780
Length = 2027
Score = 1568 bits (789), Expect = 0.0
Identities = 806/813 (99%), Gaps = 1/813 (0%)
Strand = Plus / Plus
Query: 1 gctgtcaaggtttggcagaacctagcttcattaggccactagcccagcctaaaacgtcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1113 gctgtcaaggtttggcagaacctagcttcattaggccactagcccagcctaaaacgtcaa 1172
Query: 61 cgggcaggaggaacactcccacaagacggcgtagtattctcgattcataaccattttctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1173 cgggcaggaggaacactcccacaagacggcgtagtattctcgattcataaccattttctc 1232
Query: 121 aatcgaattacacagaacacaccgtacaaacctctctatcataactacttaatagtcaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1233 aatcgaattacacagaacacaccgtacaaacctctctatcataactacttaatagtcaca 1292
Query: 181 cacgtactcgtctaaatacacatcatcgtcctacaagttcatcaaagtgttggacagaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1293 cacgtactcgtctaaatacacatcatcgtcctacaagttcatcaaagtgttggacagaca 1352
Query: 241 actataccagcatggatctcttgtatcggttcttttctcccgctctctcgcaataacaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1353 actataccagcatggatctcttgtatcggttcttttctcccgctctctcgcaataacaat 1412
Query: 301 gaacactgggtcaatcatagcctacacaggtgaacagagtagcgtttatacagggtttat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1413 gaacactgggtcaatcatagcctacacaggtgaacagagtagcgtttatacagggtttat 1472
Query: 361 acggtgattcctacggcaaaaatttttcatttctaaaaaaaaaaagaaaaatttttcttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1473 acggtgattcctacggcaaaaatttttcatttctaaaaaaaaaaagaaaaatttttcttt 1532
Query: 421 ccaacgctagaaggaaaagaaaaatctaattaaattgatttggtgattttctgagagttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1533 ccaacgctagaaggaaaagaaaaatctaattaaattgatttggtgattttctgagagttc 1592
Query: 481 cctttttcatatatcgaattttgaatatwaaaggagatcgaaaaawtttttctattcaat 540
|||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 1593 cctttttcatatatcgaattttgaatataaaaggagatcgaaaaaatttttctattcaat 1652
Query: 541 ctgttttctggttttatttgatagtttttttgtgtattattattatggattagtactggt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1653 ctgttttctggttttatttgatagtttttttgtgtattattattatggattagtactggt 1712
Query: 601 ttatatgggtttttctgtataacttctttttattttagtttgtttaatcttattttgagt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1713 ttatatgggtttttctgtataacttctttttattttagtttgtttaatcttattttgagt 1772
Query: 661 tacattatagttccctaactgc-agagaagtancattaaaaatgggtaaggaaaagtctc 719
|||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 1773 tacattatagttccctaactgcaagagaagtaacattaaaaatgggtaaggaaaagtctc 1832
Query: 720 ncgttaacgttgtcgttattggtcacgtcgattctggtaagtctaccactamcggtcatt 779
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1833 acgttaacgttgtcgttattggtcacgtcgattctggtaagtctaccactaccggtcatt 1892
Query: 780 tgatctacaagtgtggtggtattgacaagagaa 812
||||||||||||||||||||||||| |||||||
Sbjct: 1893 tgatctacaagtgtggtggtattgaaaagagaa 1925
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,781
Number of Sequences: 1807
Number of extensions: 12781
Number of successful extensions: 193
Number of sequences better than 1.0e-20: 1
length of query: 812
length of database: 10,358,551
effective HSP length: 16
effective length of query: 796
effective length of database: 10,329,639
effective search space: 8222392644
effective search space used: 8222392644
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)